[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /opt/spack/opt/spack/linux-rhel8-zen2/gcc-11.2.0/anaconda3-2022.05-q74p53iarv7fk3uin3xzsgfmov7rqomj [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  CONFIGURACAO DA RODADA   > Resolucao do Modelo :  TQ0299L064  > Resolucao do GSI :  TQ0299L064  > Data Inicial :  2026070100  > Data Final :  2026063118  > Tempo de Previsao :  09 [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /opt/spack/opt/spack/linux-rhel8-zen2/gcc-11.2.0/anaconda3-2022.05-q74p53iarv7fk3uin3xzsgfmov7rqomj [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  CONFIGURACAO DA RODADA   > Resolucao do Modelo :  TQ0299L064  > Resolucao do GSI :  TQ0299L064  > Data Inicial :  2026070100  > Data Final :  2026073118  > Tempo de Previsao :  09  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070100   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [ OK ] No active Conda environment detected. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t00z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t00z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t00z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t00z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/01/inpe.t00z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026063018/GFCTCPT20260630182026063021F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026063018/GFCTCPT20260630182026070100F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026063018/GFCTCPT20260630182026070103F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026063018/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070100/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026063018/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070100/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070100/diag_amsua_metop-b_01.2026070100 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070100/diag_amsua_metop-b_03.2026070100 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070100/diag_amsua_metop-c_01.2026070100 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070100/diag_amsua_metop-c_03.2026070100 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070100/diag_atms_n20_01.2026070100 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070100/diag_atms_n20_03.2026070100 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070100/diag_atms_n21_01.2026070100 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070100/diag_atms_n21_03.2026070100 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070100/diag_atms_npp_01.2026070100 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070100/diag_atms_npp_03.2026070100 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070100/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070100/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070100/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070100/. 15 minutes and 3 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070100 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-01 15:20:58,940 readDiag INFO read_conv_file completed in 0.903s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070100/diag_conv_01.2026070100 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 120 180 181 183 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 Variable Name : uv └── kx => 220 221 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 750 751 753 754 755 Variable Name : sst └── kx => 183 2026-07-01 15:21:02,745 readDiag INFO read_conv_file completed in 0.773s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070100/diag_conv_03.2026070100 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 120 180 181 183 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 Variable Name : uv └── kx => 220 221 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 750 751 753 754 755 Variable Name : sst └── kx => 183 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070100 2026070109 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070100  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070100  > Previsao ate :  2026070109  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070100  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070100 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070100 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/01/00 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/01/00 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/01/00/gdas.T00Z.atmanl.netcdf.2026070100 ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070100_1782930066  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070100 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070100 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070100 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070100] [INFO] Trying earlier time step: 2026063018 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T18Z.sstgrd.2026063018 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070100 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070100.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/01/00/GL_SM.GPNR.2026070100.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070100_1782930680  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070100 -F 2026070109 -W 2026070109 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 21 minutes and 15 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070106   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t06z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t06z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t06z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t06z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/01/inpe.t06z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070100/GFCTCPT20260701002026070103F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070100/GFCTCPT20260701002026070106F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070100/GFCTCPT20260701002026070109F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070100/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070106/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070100/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070106/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070106/diag_amsua_metop-b_01.2026070106 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070106/diag_amsua_metop-b_03.2026070106 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070106/diag_amsua_metop-c_01.2026070106 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070106/diag_amsua_metop-c_03.2026070106 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070106/diag_atms_n20_01.2026070106 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070106/diag_atms_n20_03.2026070106 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070106/diag_atms_n21_01.2026070106 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070106/diag_atms_n21_03.2026070106 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070106/diag_atms_npp_01.2026070106 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070106/diag_atms_npp_03.2026070106 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070106/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070106/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070106/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070106/. 13 minutes and 54 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070106 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-01 15:56:18,138 readDiag INFO read_conv_file completed in 1.006s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070106/diag_conv_01.2026070106 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 120 180 181 183 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 750 751 753 754 755 825 Variable Name : sst └── kx => 183 Variable Name : q └── kx => 120 130 2026-07-01 15:56:22,281 readDiag INFO read_conv_file completed in 0.879s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070106/diag_conv_03.2026070106 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 120 180 181 183 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 750 751 753 754 755 825 Variable Name : sst └── kx => 183 Variable Name : q └── kx => 120 130 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070106 2026070115 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070106  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070106  > Previsao ate :  2026070115  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070106  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070106 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070106 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/01/06 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/01/06 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/01/06/gdas.T06Z.atmanl.netcdf.2026070106 ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070106_1782932186  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070106 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070106 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070106 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070106] [INFO] Trying earlier time step: 2026070100 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T00Z.sstgrd.2026070100 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070106 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070106.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/01/06/GL_SM.GPNR.2026070106.vfm 2026070100 Search 1 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070100.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070106_1782932675  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070106 -F 2026070115 -W 2026070115 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 19 minutes and 11 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070112   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t12z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t12z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t12z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t12z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/01/inpe.t12z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070106/GFCTCPT20260701062026070109F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070106/GFCTCPT20260701062026070112F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070106/GFCTCPT20260701062026070115F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070106/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070112/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070106/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070112/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070112/diag_amsua_metop-b_01.2026070112 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070112/diag_amsua_metop-b_03.2026070112 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070112/diag_amsua_metop-c_01.2026070112 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070112/diag_amsua_metop-c_03.2026070112 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070112/diag_atms_n20_01.2026070112 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070112/diag_atms_n20_03.2026070112 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070112/diag_atms_n21_01.2026070112 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070112/diag_atms_n21_03.2026070112 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070112/diag_atms_npp_01.2026070112 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070112/diag_atms_npp_03.2026070112 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070112/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070112/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070112/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070112/. 13 minutes and 55 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070112 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-01 16:29:37,068 readDiag INFO read_conv_file completed in 1.268s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070112/diag_conv_01.2026070112 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 120 180 181 183 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 750 751 753 754 755 825 Variable Name : sst └── kx => 183 Variable Name : q └── kx => 120 130 2026-07-01 16:29:41,950 readDiag INFO read_conv_file completed in 0.868s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070112/diag_conv_03.2026070112 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 120 180 181 183 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 750 751 753 754 755 825 Variable Name : sst └── kx => 183 Variable Name : q └── kx => 120 130 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070112 2026070121 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070112  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070112  > Previsao ate :  2026070121  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070112  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070112 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070112 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/01/12 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/01/12 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/01/12/gdas.T12Z.atmanl.netcdf.2026070112 ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070112_1782934188  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070112 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070112 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070112 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070112] [INFO] Trying earlier time step: 2026070106 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T06Z.sstgrd.2026070106 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070112 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070112.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/01/12/GL_SM.GPNR.2026070112.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070112_1782934678  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070112 -F 2026070121 -W 2026070121 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 19 minutes and 12 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070118   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Wed Jul 1 16:49:00 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070118   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Wed Jul 1 17:19:01 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070118   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Wed Jul 1 17:49:02 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070118   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Wed Jul 1 18:19:03 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070118   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Wed Jul 1 18:49:04 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070118   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Wed Jul 1 19:19:05 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070118   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Wed Jul 1 19:49:06 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070118   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Wed Jul 1 20:19:07 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070118   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Wed Jul 1 20:49:08 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070118   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t18z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t18z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t18z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/01/gdas.t18z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/01 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/01/inpe.t18z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070112/GFCTCPT20260701122026070115F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070112/GFCTCPT20260701122026070118F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070112/GFCTCPT20260701122026070121F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070112/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070118/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070112/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070118/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070118/diag_amsua_metop-b_01.2026070118 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070118/diag_amsua_metop-b_03.2026070118 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070118/diag_amsua_metop-c_01.2026070118 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070118/diag_amsua_metop-c_03.2026070118 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070118/diag_atms_n20_01.2026070118 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070118/diag_atms_n20_03.2026070118 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070118/diag_atms_n21_01.2026070118 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070118/diag_atms_n21_03.2026070118 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070118/diag_atms_npp_01.2026070118 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070118/diag_atms_npp_03.2026070118 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070118/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070118/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070118/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070118/. 13 minutes and 53 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070118 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-01 21:33:04,184 readDiag INFO read_conv_file completed in 0.843s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070118/diag_conv_01.2026070118 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 120 180 181 183 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 Variable Name : sst └── kx => 183 Variable Name : q └── kx => 120 130 2026-07-01 21:33:07,629 readDiag INFO read_conv_file completed in 0.723s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070118/diag_conv_03.2026070118 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 120 180 181 183 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 Variable Name : sst └── kx => 183 Variable Name : q └── kx => 120 130 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070118 2026070203 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070118  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070118  > Previsao ate :  2026070203  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070118  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070118 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070118 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/01/18 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/01/18 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/01/18/gblav.T18Z.atmanl.netcdf.2026070118  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070118_1782952391  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070118 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070118 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070118 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070118] [INFO] Trying earlier time step: 2026070112 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T12Z.sstgrd.2026070112 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070118 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070118.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/01/18/GL_SM.GPNR.2026070118.vfm 2026070112 Search 1 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070112.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070118_1782952874  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070118 -F 2026070203 -W 2026070203 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 19 minutes and 6 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Wed Jul 1 21:52:17 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Wed Jul 1 22:22:18 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Wed Jul 1 22:52:19 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Wed Jul 1 23:22:19 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Wed Jul 1 23:52:20 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 00:22:22 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 00:52:23 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 01:22:24 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 01:52:25 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 02:22:26 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 02:52:26 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 03:22:29 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 03:52:31 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 04:22:32 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 04:52:33 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 05:22:33 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 05:52:35 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 06:22:35 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070200   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t00z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t00z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t00z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t00z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/02/inpe.t00z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070118/GFCTCPT20260701182026070121F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070118/GFCTCPT20260701182026070200F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070118/GFCTCPT20260701182026070203F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070118/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070200/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070118/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070200/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070200/diag_amsua_metop-b_01.2026070200 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070200/diag_amsua_metop-b_03.2026070200 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070200/diag_amsua_metop-c_01.2026070200 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070200/diag_amsua_metop-c_03.2026070200 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070200/diag_atms_n20_01.2026070200 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070200/diag_atms_n20_03.2026070200 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070200/diag_atms_n21_01.2026070200 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070200/diag_atms_n21_03.2026070200 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070200/diag_atms_npp_01.2026070200 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070200/diag_atms_npp_03.2026070200 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070200/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070200/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070200/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070200/. 14 minutes and 55 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070200 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-02 07:07:32,435 readDiag INFO read_conv_file completed in 0.904s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070200/diag_conv_01.2026070200 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 120 180 181 183 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 Variable Name : sst └── kx => 183 2026-07-02 07:07:36,162 readDiag INFO read_conv_file completed in 0.783s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070200/diag_conv_03.2026070200 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 120 180 181 183 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 Variable Name : sst └── kx => 183 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070200 2026070209 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070200  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070200  > Previsao ate :  2026070209  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070200  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070200 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070200 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/02/00 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/02/00 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/02/00/gdas.T00Z.atmanl.netcdf.2026070200 ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070200_1782986860  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070200 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070200 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070200 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070200] [INFO] Trying earlier time step: 2026070118 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T18Z.sstgrd.2026070118 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070200 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070200.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/02/00/GL_SM.GPNR.2026070200.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070200_1782987271  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070200 -F 2026070209 -W 2026070209 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 17 minutes and 53 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070206   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 07:25:33 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070206   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 07:55:34 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070206   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 08:25:37 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070206   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 08:55:38 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070206   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t06z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t06z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t06z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t06z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/02/inpe.t06z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070200/GFCTCPT20260702002026070203F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070200/GFCTCPT20260702002026070206F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070200/GFCTCPT20260702002026070209F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070200/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070206/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070200/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070206/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070206/diag_amsua_metop-b_01.2026070206 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070206/diag_amsua_metop-b_03.2026070206 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070206/diag_amsua_metop-c_01.2026070206 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070206/diag_amsua_metop-c_03.2026070206 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070206/diag_atms_n20_01.2026070206 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070206/diag_atms_n20_03.2026070206 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070206/diag_atms_n21_01.2026070206 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070206/diag_atms_n21_03.2026070206 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070206/diag_atms_npp_01.2026070206 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070206/diag_atms_npp_03.2026070206 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070206/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070206/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070206/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070206/. 13 minutes and 19 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070206 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-02 09:38:59,778 readDiag INFO read_conv_file completed in 0.950s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070206/diag_conv_01.2026070206 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 120 180 181 183 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 Variable Name : sst └── kx => 183 Variable Name : q └── kx => 120 130 2026-07-02 09:39:03,628 readDiag INFO read_conv_file completed in 0.824s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070206/diag_conv_03.2026070206 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 120 180 181 183 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 Variable Name : sst └── kx => 183 Variable Name : q └── kx => 120 130 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070206 2026070215 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070206  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070206  > Previsao ate :  2026070215  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070206  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070206 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070206 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/02/06 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/02/06 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/02/06/gblav.T06Z.atmanl.netcdf.2026070206  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070206_1782995947  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070206 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070206 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070206 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070206] [INFO] Trying earlier time step: 2026070200 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T00Z.sstgrd.2026070200 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070206 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070206.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/02/06/GL_SM.GPNR.2026070206.vfm 2026070200 Search 1 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070200.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070206_1782996413  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070206 -F 2026070215 -W 2026070215 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 18 minutes and 48 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070212   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 09:57:56 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070212   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 10:27:57 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070212   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 10:57:58 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070212   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 11:27:59 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070212   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 11:58:00 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070212   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 12:28:01 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070212   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 12:58:04 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070212   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 13:28:05 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070212   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 13:58:05 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070212   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 14:28:07 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070212   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 14:58:08 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070212   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t12z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t12z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t12z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t12z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/02/inpe.t12z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070206/GFCTCPT20260702062026070209F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070206/GFCTCPT20260702062026070212F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070206/GFCTCPT20260702062026070215F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070206/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070212/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070206/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070212/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070212/diag_amsua_metop-b_01.2026070212 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070212/diag_amsua_metop-b_03.2026070212 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070212/diag_amsua_metop-c_01.2026070212 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070212/diag_amsua_metop-c_03.2026070212 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070212/diag_atms_n20_01.2026070212 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070212/diag_atms_n20_03.2026070212 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070212/diag_atms_n21_01.2026070212 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070212/diag_atms_n21_03.2026070212 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070212/diag_atms_npp_01.2026070212 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070212/diag_atms_npp_03.2026070212 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070212/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070212/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070212/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070212/. 13 minutes and 54 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070212 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-02 15:42:05,358 readDiag INFO read_conv_file completed in 1.202s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070212/diag_conv_01.2026070212 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 120 180 181 183 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 750 751 753 754 755 Variable Name : q └── kx => 120 130 180 187 2026-07-02 15:42:09,830 readDiag INFO read_conv_file completed in 1.079s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070212/diag_conv_03.2026070212 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 120 180 181 183 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 750 751 753 754 755 Variable Name : q └── kx => 120 130 180 187 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070212 2026070221 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070212  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070212  > Previsao ate :  2026070221  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070212  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070212 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070212 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/02/12 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/02/12 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/02/12/gblav.T12Z.atmanl.netcdf.2026070212  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070212_1783017736  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070212 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070212 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070212 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070212] [INFO] Trying earlier time step: 2026070206 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T06Z.sstgrd.2026070206 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070212 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070212.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/02/12/GL_SM.GPNR.2026070212.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070212_1783018148  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070212 -F 2026070221 -W 2026070221 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 17 minutes and 55 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070218   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 16:00:10 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070218   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 16:30:11 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070218   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 17:00:12 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070218   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 17:30:13 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070218   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 18:00:15 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070218   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 18:30:16 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070218   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 19:00:17 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070218   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 19:30:18 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070218   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 20:00:19 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070218   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 20:30:20 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070218   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t18z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t18z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t18z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/02/gdas.t18z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/02 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/02/inpe.t18z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070212/GFCTCPT20260702122026070215F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070212/GFCTCPT20260702122026070218F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070212/GFCTCPT20260702122026070221F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070212/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070218/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070212/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070218/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070218/diag_amsua_metop-b_01.2026070218 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070218/diag_amsua_metop-b_03.2026070218 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070218/diag_amsua_metop-c_01.2026070218 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070218/diag_amsua_metop-c_03.2026070218 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070218/diag_atms_n20_01.2026070218 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070218/diag_atms_n20_03.2026070218 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070218/diag_atms_n21_01.2026070218 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070218/diag_atms_n21_03.2026070218 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070218/diag_atms_npp_01.2026070218 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070218/diag_atms_npp_03.2026070218 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070218/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070218/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070218/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070218/. 12 minutes and 24 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070218 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-02 21:12:46,982 readDiag INFO read_conv_file completed in 1.102s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070218/diag_conv_01.2026070218 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 120 180 181 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 180 181 187 Variable Name : uv └── kx => 220 221 228 229 230 242 243 244 245 247 250 252 253 254 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 750 751 753 754 755 825 2026-07-02 21:12:52,140 readDiag INFO read_conv_file completed in 0.770s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070218/diag_conv_03.2026070218 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 120 180 181 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 180 181 187 Variable Name : uv └── kx => 220 221 228 229 230 242 243 244 245 247 250 252 253 254 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 750 751 753 754 755 825 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070218 2026070303 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070218  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070218  > Previsao ate :  2026070303  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070218  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070218 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070218 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/02/18 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/02/18 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/02/18/gblav.T18Z.atmanl.netcdf.2026070218  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070218_1783037577  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070218 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070218 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070218 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070218] [INFO] Trying earlier time step: 2026070212 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T12Z.sstgrd.2026070212 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070218 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070218.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/02/18/GL_SM.GPNR.2026070218.vfm 2026070212 Search 1 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070212.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070218_1783038087  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070218 -F 2026070303 -W 2026070303 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 19 minutes and 33 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070300   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 21:32:31 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070300   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 22:02:33 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070300   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 22:32:34 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070300   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 23:02:35 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070300   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Thu Jul 2 23:32:42 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070300   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 00:02:43 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070300   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 00:32:44 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070300   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 01:02:45 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070300   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 01:32:46 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070300   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 02:02:47 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070300   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 02:32:48 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070300   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t00z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t00z.atms.tm00.bufr_d ]  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 03:02:50 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070300   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t00z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t00z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t00z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t00z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/03/inpe.t00z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070218/GFCTCPT20260702182026070221F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070218/GFCTCPT20260702182026070300F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070218/GFCTCPT20260702182026070303F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070218/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070300/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070218/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070300/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070300/diag_amsua_metop-b_01.2026070300 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070300/diag_amsua_metop-b_03.2026070300 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070300/diag_amsua_metop-c_01.2026070300 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070300/diag_amsua_metop-c_03.2026070300 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070300/diag_atms_n20_01.2026070300 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070300/diag_atms_n20_03.2026070300 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070300/diag_atms_n21_01.2026070300 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070300/diag_atms_n21_03.2026070300 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070300/diag_atms_npp_01.2026070300 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070300/diag_atms_npp_03.2026070300 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070300/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070300/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070300/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070300/. 14 minutes and 58 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070300 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-03 03:47:50,746 readDiag INFO read_conv_file completed in 0.989s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070300/diag_conv_01.2026070300 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 120 180 181 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 180 181 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 750 751 753 754 755 825 2026-07-03 03:47:55,293 readDiag INFO read_conv_file completed in 0.866s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070300/diag_conv_03.2026070300 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 120 180 181 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 180 181 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 750 751 753 754 755 825 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070300 2026070309 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070300  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070300  > Previsao ate :  2026070309  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070300  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070300 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070300 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/03/00 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/03/00 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/03/00/gblav.T00Z.atmanl.netcdf.2026070300  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070300_1783061279  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070300 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070300 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070300 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070300] [INFO] Trying earlier time step: 2026070218 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T18Z.sstgrd.2026070218 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070300 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070300.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/03/00/GL_SM.GPNR.2026070300.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070300_1783061760  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070300 -F 2026070309 -W 2026070309 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 18 minutes and 30 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070306   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 04:06:30 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070306   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 04:36:32 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070306   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 05:06:32 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070306   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 05:36:33 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070306   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 06:06:34 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070306   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 06:36:35 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070306   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 07:06:36 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070306   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 07:36:37 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070306   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 08:06:38 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070306   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 08:36:39 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070306   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t06z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t06z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t06z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t06z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/03/inpe.t06z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070300/GFCTCPT20260703002026070303F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070300/GFCTCPT20260703002026070306F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070300/GFCTCPT20260703002026070309F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070300/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070306/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070300/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070306/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070306/diag_amsua_metop-b_01.2026070306 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070306/diag_amsua_metop-b_03.2026070306 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070306/diag_amsua_metop-c_01.2026070306 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070306/diag_amsua_metop-c_03.2026070306 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070306/diag_atms_n20_01.2026070306 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070306/diag_atms_n20_03.2026070306 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070306/diag_atms_n21_01.2026070306 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070306/diag_atms_n21_03.2026070306 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070306/diag_atms_npp_01.2026070306 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070306/diag_atms_npp_03.2026070306 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070306/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070306/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070306/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070306/. 13 minutes and 22 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070306 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-03 09:20:04,640 readDiag INFO read_conv_file completed in 1.399s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070306/diag_conv_01.2026070306 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 120 180 181 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 180 181 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 750 751 753 754 755 825 2026-07-03 09:20:15,327 readDiag INFO read_conv_file completed in 1.038s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070306/diag_conv_03.2026070306 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 120 180 181 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 180 181 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 750 751 753 754 755 825 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070306 2026070315 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070306  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070306  > Previsao ate :  2026070315  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070306  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070306 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070306 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/03/06 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/03/06 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/03/06/gblav.T06Z.atmanl.netcdf.2026070306  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070306_1783081224  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070306 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070306 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070306 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070306] [INFO] Trying earlier time step: 2026070300 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T00Z.sstgrd.2026070300 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070306 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070306.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/03/06/GL_SM.GPNR.2026070306.vfm 2026070300 Search 1 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070300.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070306_1783081707  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070306 -F 2026070315 -W 2026070315 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 19 minutes and 5 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070312   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 09:39:30 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070312   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 10:09:31 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070312   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 10:39:34 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070312   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 11:09:34 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070312   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 11:39:35 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070312   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 12:09:36 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070312   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 12:39:37 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070312   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 13:09:38 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070312   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 13:39:39 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070312   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 14:09:42 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070312   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 14:39:43 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070312   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t12z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t12z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t12z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t12z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/03/inpe.t12z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070306/GFCTCPT20260703062026070309F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070306/GFCTCPT20260703062026070312F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070306/GFCTCPT20260703062026070315F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070306/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070312/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070306/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070312/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070312/diag_amsua_metop-b_01.2026070312 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070312/diag_amsua_metop-b_03.2026070312 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070312/diag_amsua_metop-c_01.2026070312 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070312/diag_amsua_metop-c_03.2026070312 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070312/diag_atms_n20_01.2026070312 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070312/diag_atms_n20_03.2026070312 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070312/diag_atms_n21_01.2026070312 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070312/diag_atms_n21_03.2026070312 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070312/diag_atms_npp_01.2026070312 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070312/diag_atms_npp_03.2026070312 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070312/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070312/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070312/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070312/. 14 minutes and 35 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070312 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-03 15:24:23,234 readDiag INFO read_conv_file completed in 2.017s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070312/diag_conv_01.2026070312 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 120 180 181 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 180 181 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 2026-07-03 15:24:32,430 readDiag INFO read_conv_file completed in 0.973s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070312/diag_conv_03.2026070312 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 120 180 181 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 180 181 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070312 2026070321 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070312  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070312  > Previsao ate :  2026070321  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070312  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070312 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070312 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/03/12 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/03/12 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/03/12/gblav.T12Z.atmanl.netcdf.2026070312  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070312_1783103080  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070312 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070312 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070312 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070312] [INFO] Trying earlier time step: 2026070306 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T06Z.sstgrd.2026070306 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070312 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070312.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/03/12/GL_SM.GPNR.2026070312.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070312_1783103549  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070312 -F 2026070321 -W 2026070321 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 18 minutes and 51 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070318   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 15:43:33 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070318   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 16:13:34 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070318   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 16:43:35 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070318   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 17:13:37 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070318   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 17:43:38 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070318   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 18:13:39 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070318   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 18:43:43 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070318   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 19:13:44 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070318   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 19:43:45 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070318   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 20:13:46 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070318   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 20:43:47 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070318   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t18z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t18z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t18z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/03/gdas.t18z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/03 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/03/inpe.t18z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070312/GFCTCPT20260703122026070315F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070312/GFCTCPT20260703122026070318F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070312/GFCTCPT20260703122026070321F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070312/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070318/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070312/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070318/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070318/diag_amsua_metop-b_01.2026070318 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070318/diag_amsua_metop-b_03.2026070318 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070318/diag_amsua_metop-c_01.2026070318 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070318/diag_amsua_metop-c_03.2026070318 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070318/diag_atms_n20_01.2026070318 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070318/diag_atms_n20_03.2026070318 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070318/diag_atms_n21_01.2026070318 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070318/diag_atms_n21_03.2026070318 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070318/diag_atms_npp_01.2026070318 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070318/diag_atms_npp_03.2026070318 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070318/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070318/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070318/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070318/. 13 minutes and 59 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070318 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-03 21:27:50,001 readDiag INFO read_conv_file completed in 2.101s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070318/diag_conv_01.2026070318 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 120 180 181 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 180 181 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 2026-07-03 21:27:59,786 readDiag INFO read_conv_file completed in 0.908s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070318/diag_conv_03.2026070318 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 120 180 181 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 180 181 187 Variable Name : uv └── kx => 220 221 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070318 2026070403 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070318  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070318  > Previsao ate :  2026070403  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070318  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070318 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070318 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/03/18 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/03/18 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/03/18/gblav.T18Z.atmanl.netcdf.2026070318  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070318_1783124888  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070318 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070318 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070318 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070318] [INFO] Trying earlier time step: 2026070312 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T12Z.sstgrd.2026070312 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070318 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070318.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/03/18/GL_SM.GPNR.2026070318.vfm 2026070312 Search 1 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070312.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070318_1783125359  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070318 -F 2026070403 -W 2026070403 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 18 minutes and 53 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070400   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 21:47:01 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070400   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 22:17:02 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070400   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 22:47:04 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070400   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 23:17:05 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070400   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Fri Jul 3 23:47:06 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070400   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 00:17:07 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070400   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 00:47:08 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070400   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 01:17:09 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070400   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 01:47:10 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070400   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 02:17:11 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070400   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 02:47:12 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070400   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t00z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t00z.atms.tm00.bufr_d ]  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t00z.satwnd.tm00.bufr_d ] falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 03:17:17 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070400   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t00z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t00z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t00z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t00z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/04/inpe.t00z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070318/GFCTCPT20260703182026070321F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070318/GFCTCPT20260703182026070400F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070318/GFCTCPT20260703182026070403F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070318/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070400/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070318/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070400/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070400/diag_amsua_metop-b_01.2026070400 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070400/diag_amsua_metop-b_03.2026070400 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070400/diag_amsua_metop-c_01.2026070400 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070400/diag_amsua_metop-c_03.2026070400 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070400/diag_atms_n20_01.2026070400 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070400/diag_atms_n20_03.2026070400 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070400/diag_atms_n21_01.2026070400 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070400/diag_atms_n21_03.2026070400 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070400/diag_atms_npp_01.2026070400 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070400/diag_atms_npp_03.2026070400 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070400/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070400/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070400/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070400/. 14 minutes and 56 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070400 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-04 04:02:15,313 readDiag INFO read_conv_file completed in 0.930s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070400/diag_conv_01.2026070400 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 2026-07-04 04:02:19,144 readDiag INFO read_conv_file completed in 0.799s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070400/diag_conv_03.2026070400 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070400 2026070409 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070400  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070400  > Previsao ate :  2026070409  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070400  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070400 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070400 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/04/00 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/04/00 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/04/00/gblav.T00Z.atmanl.netcdf.2026070400  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070400_1783148543  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070400 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070400 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070400 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070400] [INFO] Trying earlier time step: 2026070318 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T18Z.sstgrd.2026070318 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070400 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070400.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/04/00/GL_SM.GPNR.2026070400.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070400_1783149009  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070400 -F 2026070409 -W 2026070409 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 18 minutes and 49 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070406   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 04:21:12 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070406   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 04:51:13 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070406   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 05:21:13 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070406   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 05:51:14 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070406   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 06:21:15 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070406   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 06:51:17 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070406   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 07:21:18 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070406   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 07:51:21 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070406   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 08:21:22 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070406   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 08:51:23 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070406   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t06z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t06z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t06z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t06z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/04/inpe.t06z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070400/GFCTCPT20260704002026070403F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070400/GFCTCPT20260704002026070406F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070400/GFCTCPT20260704002026070409F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070400/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070406/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070400/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070406/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070406/diag_amsua_metop-b_01.2026070406 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070406/diag_amsua_metop-b_03.2026070406 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070406/diag_amsua_metop-c_01.2026070406 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070406/diag_amsua_metop-c_03.2026070406 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070406/diag_atms_n20_01.2026070406 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070406/diag_atms_n20_03.2026070406 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070406/diag_atms_n21_01.2026070406 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070406/diag_atms_n21_03.2026070406 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070406/diag_atms_npp_01.2026070406 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070406/diag_atms_npp_03.2026070406 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070406/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070406/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070406/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070406/. 13 minutes and 25 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070406 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-04 09:34:50,139 readDiag INFO read_conv_file completed in 0.927s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070406/diag_conv_01.2026070406 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 2026-07-04 09:34:54,076 readDiag INFO read_conv_file completed in 0.801s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070406/diag_conv_03.2026070406 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070406 2026070415 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070406  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070406  > Previsao ate :  2026070415  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070406  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070406 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070406 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/04/06 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/04/06 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/04/06/gblav.T06Z.atmanl.netcdf.2026070406  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070406_1783168499  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070406 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070406 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070406 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070406] [INFO] Trying earlier time step: 2026070400 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T00Z.sstgrd.2026070400 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070406 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070406.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/04/06/GL_SM.GPNR.2026070406.vfm 2026070400 Search 1 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070400.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070406_1783168959  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070406 -F 2026070415 -W 2026070415 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 18 minutes and 43 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070412   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 09:53:41 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070412   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 10:23:42 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070412   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 10:53:43 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070412   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 11:23:44 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070412   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 11:53:45 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070412   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 12:23:46 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070412   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 12:53:47 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070412   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 13:23:48 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070412   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 13:53:49 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070412   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 14:23:50 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070412   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 14:53:51 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070412   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t12z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t12z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t12z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t12z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/04/inpe.t12z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070406/GFCTCPT20260704062026070409F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070406/GFCTCPT20260704062026070412F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070406/GFCTCPT20260704062026070415F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070406/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070412/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070406/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070412/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070412/diag_amsua_metop-b_01.2026070412 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070412/diag_amsua_metop-b_03.2026070412 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070412/diag_amsua_metop-c_01.2026070412 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070412/diag_amsua_metop-c_03.2026070412 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070412/diag_atms_n20_01.2026070412 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070412/diag_atms_n20_03.2026070412 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070412/diag_atms_n21_01.2026070412 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070412/diag_atms_n21_03.2026070412 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070412/diag_atms_npp_01.2026070412 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070412/diag_atms_npp_03.2026070412 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070412/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070412/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070412/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070412/. 14 minutes and 58 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070412 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-04 15:38:53,823 readDiag INFO read_conv_file completed in 2.224s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070412/diag_conv_01.2026070412 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 120 180 181 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 180 181 187 Variable Name : uv └── kx => 220 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 2026-07-04 15:39:02,999 readDiag INFO read_conv_file completed in 1.102s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070412/diag_conv_03.2026070412 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 120 180 181 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 180 181 187 Variable Name : uv └── kx => 220 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070412 2026070421 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070412  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070412  > Previsao ate :  2026070421  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070412  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070412 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070412 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/04/12 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/04/12 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/04/12/gblav.T12Z.atmanl.netcdf.2026070412  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070412_1783190351  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070412 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070412 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070412 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070412] [INFO] Trying earlier time step: 2026070406 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T06Z.sstgrd.2026070406 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070412 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070412.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/04/12/GL_SM.GPNR.2026070412.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070412_1783190793  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070412 -F 2026070421 -W 2026070421 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 18 minutes and 24 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070418   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 15:57:36 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070418   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 16:27:37 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070418   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 16:57:37 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070418   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 17:27:38 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070418   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 17:57:40 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070418   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 18:27:41 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070418   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 18:57:41 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070418   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 19:27:42 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070418   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 19:57:44 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070418   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 20:27:45 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070418   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 20:57:46 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070418   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t18z.atms.tm00.bufr_d ]  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 21:27:48 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070418   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t18z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t18z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t18z.gpsro.tm00.bufr_d.nr ]  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 21:57:51 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070418   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t18z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t18z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t18z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/04/gdas.t18z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/04 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/04/inpe.t18z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070412/GFCTCPT20260704122026070415F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070412/GFCTCPT20260704122026070418F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070412/GFCTCPT20260704122026070421F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070412/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070418/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070412/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070418/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070418/diag_amsua_metop-b_01.2026070418 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070418/diag_amsua_metop-b_03.2026070418 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070418/diag_amsua_metop-c_01.2026070418 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070418/diag_amsua_metop-c_03.2026070418 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070418/diag_atms_n20_01.2026070418 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070418/diag_atms_n20_03.2026070418 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070418/diag_atms_n21_01.2026070418 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070418/diag_atms_n21_03.2026070418 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070418/diag_atms_npp_01.2026070418 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070418/diag_atms_npp_03.2026070418 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070418/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070418/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070418/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070418/. 14 minutes and 29 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070418 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-04 22:42:22,721 readDiag INFO read_conv_file completed in 0.889s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070418/diag_conv_01.2026070418 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 2026-07-04 22:42:26,724 readDiag INFO read_conv_file completed in 0.929s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070418/diag_conv_03.2026070418 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070418 2026070503 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070418  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070418  > Previsao ate :  2026070503  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070418  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070418 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070418 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/04/18 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/04/18 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/04/18/gdas.T18Z.atmanl.netcdf.2026070418 ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070418_1783215751  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070418 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070418 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070418 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070418] [INFO] Trying earlier time step: 2026070412 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T12Z.sstgrd.2026070412 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070418 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070418.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/04/18/GL_SM.GPNR.2026070418.vfm 2026070412 Search 1 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070412.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070418_1783216219  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070418 -F 2026070503 -W 2026070503 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 18 minutes and 51 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070500   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 23:01:22 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070500   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sat Jul 4 23:31:22 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070500   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 00:01:23 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070500   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 00:31:24 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070500   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 01:01:25 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070500   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 01:31:26 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070500   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 02:01:27 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070500   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 02:31:28 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070500   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t00z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t00z.atms.tm00.bufr_d ]  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t00z.satwnd.tm00.bufr_d ] falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 03:01:31 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070500   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t00z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t00z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t00z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t00z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/05/inpe.t00z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070418/GFCTCPT20260704182026070421F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070418/GFCTCPT20260704182026070500F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070418/GFCTCPT20260704182026070503F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070418/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070500/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070418/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070500/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070500/diag_amsua_metop-b_01.2026070500 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070500/diag_amsua_metop-b_03.2026070500 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070500/diag_amsua_metop-c_01.2026070500 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070500/diag_amsua_metop-c_03.2026070500 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070500/diag_atms_n20_01.2026070500 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070500/diag_atms_n20_03.2026070500 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070500/diag_atms_n21_01.2026070500 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070500/diag_atms_n21_03.2026070500 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070500/diag_atms_npp_01.2026070500 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070500/diag_atms_npp_03.2026070500 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070500/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070500/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070500/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070500/. 16 minutes and 6 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070500 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-05 03:47:39,893 readDiag INFO read_conv_file completed in 0.918s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070500/diag_conv_01.2026070500 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 2026-07-05 03:47:43,700 readDiag INFO read_conv_file completed in 0.795s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070500/diag_conv_03.2026070500 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070500 2026070509 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070500  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070500  > Previsao ate :  2026070509  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070500  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070500 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070500 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/05/00 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/05/00 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/05/00/gblav.T00Z.atmanl.netcdf.2026070500  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070500_1783234067  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070500 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070500 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070500 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070500] [INFO] Trying earlier time step: 2026070418 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T18Z.sstgrd.2026070418 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070500 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070500.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/05/00/GL_SM.GPNR.2026070500.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070500_1783234480  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070500 -F 2026070509 -W 2026070509 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 17 minutes and 55 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070506   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 04:05:44 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070506   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 04:35:45 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070506   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 05:05:46 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070506   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 05:35:48 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070506   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 06:05:50 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070506   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 06:35:52 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070506   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 07:05:54 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070506   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 07:35:55 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070506   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 08:05:56 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070506   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 08:35:57 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070506   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t06z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t06z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t06z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t06z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/05/inpe.t06z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070500/GFCTCPT20260705002026070503F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070500/GFCTCPT20260705002026070506F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070500/GFCTCPT20260705002026070509F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070500/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070506/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070500/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070506/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070506/diag_amsua_metop-b_01.2026070506 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070506/diag_amsua_metop-b_03.2026070506 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070506/diag_amsua_metop-c_01.2026070506 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070506/diag_amsua_metop-c_03.2026070506 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070506/diag_atms_n20_01.2026070506 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070506/diag_atms_n20_03.2026070506 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070506/diag_atms_n21_01.2026070506 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070506/diag_atms_n21_03.2026070506 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070506/diag_atms_npp_01.2026070506 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070506/diag_atms_npp_03.2026070506 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070506/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070506/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070506/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070506/. 13 minutes and 56 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070506 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-05 09:19:55,748 readDiag INFO read_conv_file completed in 0.956s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070506/diag_conv_01.2026070506 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 2026-07-05 09:19:59,677 readDiag INFO read_conv_file completed in 0.830s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070506/diag_conv_03.2026070506 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070506 2026070515 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070506  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070506  > Previsao ate :  2026070515  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070506  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070506 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070506 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/05/06 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/05/06 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/05/06/gblav.T06Z.atmanl.netcdf.2026070506  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070506_1783254003  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070506 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070506 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070506 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070506] [INFO] Trying earlier time step: 2026070500 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T00Z.sstgrd.2026070500 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070506 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070506.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/05/06/GL_SM.GPNR.2026070506.vfm 2026070500 Search 1 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070500.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070506_1783254468  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070506 -F 2026070515 -W 2026070515 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 18 minutes and 47 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070512   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 09:38:51 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070512   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 10:08:52 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070512   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 10:38:53 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070512   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 11:08:54 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070512   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 11:38:55 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070512   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 12:08:56 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070512   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 12:38:57 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070512   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 13:08:58 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070512   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 13:38:59 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070512   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 14:09:00 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070512   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t12z.1bamua.tm00.bufr_d  File not found  gdas.t12z.atms.tm00.bufr_d  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr  File not found  gdas.t12z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 14:39:01 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070512   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t12z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t12z.atms.tm00.bufr_d ]  File not found  gdas.t12z.gpsro.tm00.bufr_d.nr [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t12z.satwnd.tm00.bufr_d ] falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 15:09:06 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070512   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t12z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t12z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t12z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t12z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/05/inpe.t12z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070506/GFCTCPT20260705062026070509F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070506/GFCTCPT20260705062026070512F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070506/GFCTCPT20260705062026070515F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070506/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070512/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070506/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070512/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070512/diag_amsua_metop-b_01.2026070512 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070512/diag_amsua_metop-b_03.2026070512 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070512/diag_amsua_metop-c_01.2026070512 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070512/diag_amsua_metop-c_03.2026070512 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070512/diag_atms_n20_01.2026070512 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070512/diag_atms_n20_03.2026070512 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070512/diag_atms_n21_01.2026070512 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070512/diag_atms_n21_03.2026070512 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070512/diag_atms_npp_01.2026070512 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070512/diag_atms_npp_03.2026070512 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070512/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070512/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070512/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070512/. 14 minutes and 29 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070512 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-05 15:53:38,612 readDiag INFO read_conv_file completed in 1.012s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070512/diag_conv_01.2026070512 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 120 180 181 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 180 181 187 Variable Name : uv └── kx => 220 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 2026-07-05 15:53:42,685 readDiag INFO read_conv_file completed in 0.868s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070512/diag_conv_03.2026070512 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 120 180 181 187 Variable Name : t └── kx => 120 130 180 181 183 187 Variable Name : q └── kx => 120 130 180 181 187 Variable Name : uv └── kx => 220 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070512 2026070521 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070512  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070512  > Previsao ate :  2026070521  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070512  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070512 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070512 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/05/12 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/05/12 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/05/12/gblav.T12Z.atmanl.netcdf.2026070512  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070512_1783277627  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070512 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070512 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070512 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070512] [INFO] Trying earlier time step: 2026070506 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T06Z.sstgrd.2026070506 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070512 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070512.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/05/12/GL_SM.GPNR.2026070512.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070512_1783278090  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070512 -F 2026070521 -W 2026070521 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 18 minutes and 45 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070518   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 16:12:32 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070518   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 16:42:34 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070518   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 17:12:35 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070518   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 17:42:37 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070518   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 18:12:39 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070518   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 18:42:40 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070518   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 19:12:41 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070518   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 19:42:42 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070518   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 20:12:43 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070518   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t18z.1bamua.tm00.bufr_d  File not found  gdas.t18z.atms.tm00.bufr_d  File not found  gdas.t18z.gpsro.tm00.bufr_d.nr  File not found  gdas.t18z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 20:42:44 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070518   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t18z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t18z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t18z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/05/gdas.t18z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/05 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/05/inpe.t18z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070512/GFCTCPT20260705122026070515F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070512/GFCTCPT20260705122026070518F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070512/GFCTCPT20260705122026070521F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070512/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070518/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070512/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070518/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070518/diag_amsua_metop-b_01.2026070518 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070518/diag_amsua_metop-b_03.2026070518 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070518/diag_amsua_metop-c_01.2026070518 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070518/diag_amsua_metop-c_03.2026070518 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070518/diag_atms_n20_01.2026070518 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070518/diag_atms_n20_03.2026070518 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070518/diag_atms_n21_01.2026070518 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070518/diag_atms_n21_03.2026070518 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070518/diag_atms_npp_01.2026070518 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070518/diag_atms_npp_03.2026070518 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070518/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070518/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070518/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070518/. 14 minutes and 30 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070518 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-05 21:27:16,211 readDiag INFO read_conv_file completed in 0.931s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070518/diag_conv_01.2026070518 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 2026-07-05 21:27:20,038 readDiag INFO read_conv_file completed in 0.797s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070518/diag_conv_03.2026070518 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070518 2026070603 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070518  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070518  > Previsao ate :  2026070603  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070518  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070518 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070518 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/05/18 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/05/18 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/05/18/gblav.T18Z.atmanl.netcdf.2026070518  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070518_1783297644  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070518 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070518 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070518 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070518] [INFO] Trying earlier time step: 2026070512 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T12Z.sstgrd.2026070512 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070518 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070518.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/05/18/GL_SM.GPNR.2026070518.vfm 2026070512 Search 1 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070512.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070518_1783298109  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070518 -F 2026070603 -W 2026070603 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 18 minutes and 48 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070600   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 21:46:12 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070600   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 22:16:13 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070600   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 22:46:14 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070600   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 23:16:15 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070600   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Sun Jul 5 23:46:16 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070600   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 00:16:17 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070600   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 00:46:18 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070600   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 01:16:19 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070600   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 01:46:20 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070600   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 02:16:22 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070600   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t00z.1bamua.tm00.bufr_d  File not found  gdas.t00z.atms.tm00.bufr_d  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 02:46:23 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070600   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06/gdas.t00z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06/gdas.t00z.atms.tm00.bufr_d ]  File not found  gdas.t00z.gpsro.tm00.bufr_d.nr  File not found  gdas.t00z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 03:16:25 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070600   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06/gdas.t00z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06/gdas.t00z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06/gdas.t00z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06/gdas.t00z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/06/inpe.t00z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070518/GFCTCPT20260705182026070521F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070518/GFCTCPT20260705182026070600F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070518/GFCTCPT20260705182026070603F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070518/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070600/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070518/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070600/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070600/diag_amsua_metop-b_01.2026070600 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070600/diag_amsua_metop-b_03.2026070600 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070600/diag_amsua_metop-c_01.2026070600 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070600/diag_amsua_metop-c_03.2026070600 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070600/diag_atms_n20_01.2026070600 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070600/diag_atms_n20_03.2026070600 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070600/diag_atms_n21_01.2026070600 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070600/diag_atms_n21_03.2026070600 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070600/diag_atms_npp_01.2026070600 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070600/diag_atms_npp_03.2026070600 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070600/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070600/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070600/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070600/. 15 minutes and 33 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070600 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-06 04:02:00,702 readDiag INFO read_conv_file completed in 0.745s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070600/diag_conv_01.2026070600 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 2026-07-06 04:02:03,850 readDiag INFO read_conv_file completed in 0.651s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070600/diag_conv_03.2026070600 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 43 44 66 267 269 751 753 754 755 825 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070600 2026070609 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070600  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070600  > Previsao ate :  2026070609  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070600  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070600 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070600 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/06/00 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/06/00 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/06/00/gblav.T00Z.atmanl.netcdf.2026070600  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070600_1783321328  Running Pre-processes at egeon  Running PreBAM  [ OK ] 1st call to runPre. Status: 0  Running BAM Pre-process for 2026070600 [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070600 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [NOT] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [RUN] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [RUN] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [RUN] SSTWeeklyNCEP [RUN] SSTWeekly [NOT] SNOWWeekly [RUN] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [RUN] TopographyGradient [INFO] Detected: EGEON Cluster [INFO] Searching SST on egeon [INFO] Target SST date: 2026070600 [INFO] Attempting SST retrieval (try 0) [FAIL: No valid SST file found for 2026070600] [INFO] Trying earlier time step: 2026070518 [INFO] Checking if SST was previously converted... [INFO] Reusing previous SST file: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/gdas1.T18Z.sstgrd.2026070518 [INFO] Detected: EGEON Cluster  Getting Soil Moisture file for: 2026070600 Search 0 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain/GL_SM.GPNR.2026070600.vfm Search 0 /oper/dados/modelo/umid_solo/brutos/2026/07/06/00/GL_SM.GPNR.2026070600.vfm ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070600_1783321735  Running Pre-processes at egeon  Running PreBAM  [ OK ] 2nd call to runPre. Status: 0 [INFO] Detected: EGEON Cluster running :: runModel -das -v -np 64 -N 16 -d 8 -t 299 -l 64 -I 2026070600 -F 2026070609 -W 2026070609 -px CPT -py CPT -s sstwkl -ts 3 -r -tr 6 -i -3 -s sstwkl [INFO] Detected: EGEON Cluster  Running BAM  [ OK ] 17 minutes and 49 seconds elapsed.  > Fim do MCGA   >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070606   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 04:19:59 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070606   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 04:50:01 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070606   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 05:20:02 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070606   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 05:50:04 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070606   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 06:20:04 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070606   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 06:50:05 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070606   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 07:20:06 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070606   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 07:50:07 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070606   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 08:20:08 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070606   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP  File not found  gdas.t06z.1bamua.tm00.bufr_d  File not found  gdas.t06z.atms.tm00.bufr_d  File not found  gdas.t06z.gpsro.tm00.bufr_d.nr  File not found  gdas.t06z.satwnd.tm00.bufr_d falta dados do NCEP.. esperar e rodar novamente...  > Falha no GSI  data: Mon Jul 6 08:50:09 -03 2026  > Aguardando dados disponiveis:  30 min 20 min 10 min 1 min  >>> Submetendo o Sistema SMNA_v3.0.0.t12717/SMG para o dia 2026070606   > Executando o GSI  [INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >>>> Carregando arquivos prepBufrs do NCEP  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : amsuabufrNCEP atmsbufrNCEP gpsrobufrNCEP satwndbufrNCEP [ OK ] link amsuabufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06/gdas.t06z.1bamua.tm00.bufr_d ] [ OK ] link atmsbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06/gdas.t06z.atms.tm00.bufr_d ] [ OK ] link gpsrobufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06/gdas.t06z.gpsro.tm00.bufr_d.nr ] [ OK ] link satwndbufrNCEP @ [ /oper/dados/dboper/raw/arch/mod/ncep/gdas/2026/07/06/gdas.t06z.satwnd.tm00.bufr_d ]  Found 4 observation files from NCEP to use  >>>> Carregando arquivos prepBufrs do INPE  @linkObs : obsPath : /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/06 obsGSI : /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/obsfiles.rc parmGSI : names : prepbufrINPE [ OK ] link prepbufrINPE @ [ /oper/dados/dboper/raw/arch/mod/cptec/gdas/2026/07/06/inpe.t06z.prepbufr.nr ]  Found 1 observation files from INPE to use Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070600/GFCTCPT20260706002026070603F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070600/GFCTCPT20260706002026070606F.fct.TQ0299L064 Forecast file : /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/model/dataout/TQ0299L064/DAS/2026070600/GFCTCPT20260706002026070609F.fct.TQ0299L064 Copy of Public fixed files cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070600/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070606/satbias_in cp -pfr /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070600/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070606/satbias_pc Entrando no ciclo de BcCycles para 0  Running GSI  using /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/cptec/gsi/fix/gsiparm.anl to setup GSI run  [ OK ] >>> mergeDiagFiles Merging diag files amsua_metop-b, outer loop 01 [ OK ] Merging diag files amsua_metop-b, outer loop 03 [ OK ] Merging diag files amsua_metop-c, outer loop 01 [ OK ] Merging diag files amsua_metop-c, outer loop 03 [ OK ] Merging diag files atms_n20, outer loop 01 [ OK ] Merging diag files atms_n20, outer loop 03 [ OK ] Merging diag files atms_n21, outer loop 01 [ OK ] Merging diag files atms_n21, outer loop 03 [ OK ] Merging diag files atms_npp, outer loop 01 [ OK ] Merging diag files atms_npp, outer loop 03 [ OK ] Merging diag files conv, outer loop 01 [ OK ] Merging diag files conv, outer loop 03 [ OK ] Merging diag files obs, outer loop setup [ OK ] >>> mergeDiagFiles do diagnostico da radiβncia /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070606/diag_amsua_metop-b_01.2026070606 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070606/diag_amsua_metop-b_03.2026070606 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070606/diag_amsua_metop-c_01.2026070606 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070606/diag_amsua_metop-c_03.2026070606 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070606/diag_atms_n20_01.2026070606 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070606/diag_atms_n20_03.2026070606 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070606/diag_atms_n21_01.2026070606 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070606/diag_atms_n21_03.2026070606 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070606/diag_atms_npp_01.2026070606 /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070606/diag_atms_npp_03.2026070606 cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070606/satbias_out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070606/. cp -pf /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datarun/gsi/2026070606/satbias_pc.out /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070606/. 11 minutes and 49 seconds elapsed.  > Fim do GSI  Testando os dados convencionais do CPTEC se ok: 2026070606 >>>>>>> Verificar dados assimilados.... /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/./runPythonCheck.py:3: DeprecationWarning: You are importing the legacy package 'gsidiag'. This interface is deprecated and will be removed in a future major release. Please migrate to 'readDiag.open.open_diagnostic' and the DiagnosticAPI. import gsidiag as gd 2026-07-06 09:31:59,897 readDiag INFO read_conv_file completed in 0.590s ##### Lendo o arquivo do OMF: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070606/diag_conv_01.2026070606 ##### Lista das variaveis disponiveis no OMF (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 44 66 267 269 751 753 754 755 2026-07-06 09:32:02,909 readDiag INFO read_conv_file completed in 0.599s ##### Lendo o arquivo do OMA: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/gsi/dataout/2026070606/diag_conv_03.2026070606 ##### Lista das variaveis disponiveis no OMA (pfileinfo): Variable Name : ps └── kx => 180 181 187 Variable Name : t └── kx => 130 180 181 183 187 Variable Name : q └── kx => 130 180 181 187 Variable Name : uv └── kx => 228 229 230 240 242 243 244 245 246 247 250 252 253 254 255 260 280 281 284 287 Variable Name : gps └── kx => 3 5 42 44 66 267 269 751 753 754 755 ----------------- Fim do teste do Python --------------------  > Executando o MCGA  /bin/bash /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/run/scripts/run_model.sh 2026070606 2026070615 CPT 299 64 64 No This will run on EGEON Cluster ...[INFO] Installation path: SMG_ROOT=/home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG [INFO] Selected option: vars_export [INFO] Detected: EGEON Cluster [INFO] Using local CMake at: /home/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/util/cmake/bin/cmake [WARNING] Conda environment detected: /home/caroline.viezel/.conda/envs/readDiagGerd [ACTION] Deactivating Conda... [ OK ] Conda has been disabled. [ OK ] Running: vars_export  >> Submetendo o MCGA: 2026070606  > Resolucao (espectral) :  TQ0299L064  > Resolucao (grade) :  G00450L064   > Condicao Inicial :  2026070606  > Previsao ate :  2026070615  > Pos-proc. Ativado :  no  Running BAM Pre-process for 2026070606  SmoothTopo = .TRUE.  set PREFIX =  SMT [INFO] Detected: EGEON Cluster [INFO] MPI/OpenMP layout resolved: MPI ranks (MPITasks) : 128 Threads per rank (-d) : 1 Total logical cores : 128 Cores per node : 128 Compute nodes : 1 Tasks per node : 128 SLURM flags : --nodes=1 --ntasks=128 --cpus-per-task=1 PBS flags : -l select=1:ncpus=128:mpiprocs=128:ompthreads=1 --- Final runPre configuration --- TRC=299 LV=64 LABELI=2026070606 MPI tasks=128 Threads/task=1 Nodes=1 ----------------------------------- list of processes that will be executed [NOT] TopoWaterPercNavy [NOT] TopoWaterPercGT30 [NOT] NormalModes [NOT] LandSeaMask [NOT] VarTopo [NOT] TopoSpectral [RUN] Chopping [NOT] VegetationMaskSSiB [NOT] VegetationMask [NOT] VegetationMaskIBISClima [NOT] VegetationMaskIBIS [NOT] VegetationAlbedoSSiB [NOT] DeepSoilTemperatureClima [NOT] DeepSoilTemperature [NOT] RoughnessLengthClima [NOT] RoughnessLength [NOT] SoilMoistureClima [NOT] SoilMoisture [NOT] AlbedoClima [NOT] Albedo [NOT] SnowClima [NOT] SSTClima [NOT] FLUXCO2Clima [NOT] SSTWeeklyNCEP [NOT] SSTWeekly [NOT] SNOWWeekly [NOT] SoilMoistureWeekly [NOT] CLimaSoilMoistureClima [NOT] CLimaSoilMoisture [NOT] TemperatureClima [NOT] Temperature [NOT] DeltaTempColdestClima [NOT] DeltaTempColdest [NOT] NDVIClima [NOT] NDVI [NOT] OCMClima [NOT] CO2MonthlyDirec [NOT] SSTDailyDirec [NOT] SSTSeasonDirec [NOT] PorceClayMaskIBISClima [NOT] PorceClayMaskIBIS [NOT] PorceSandMaskIBISClima [NOT] PorceSandMaskIBIS [NOT] SSTMonthlyDirec [NOT] TopographyGradient [INFO] Procurando an?lise NCEP para: 2026070606 [INFO] Detected: EGEON Cluster [INFO] Caminhos de busca: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain:/oper/dados/ioper/tempo/NCEP/input/2026/07/06/06 [INFO] Verificando diret?rio: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/datain [INFO] Verificando diret?rio: /oper/dados/ioper/tempo/NCEP/input/2026/07/06/06 [INFO] Arquivo encontrado: /oper/dados/ioper/tempo/NCEP/input/2026/07/06/06/gblav.T06Z.atmanl.netcdf.2026070606  >>>> WARNNING <<<< Using  gblav  anl file GDASType was set as: Netcdf  Is this correct?  >>>>>>>>><<<<<<<<< ln: /mnt/beegfs/luiz.sapucci/SMNA_v3.0.0.t12717/SMG/datainout/bam/pre/databcs/gtopo30: cannot overwrite directory  Log Label: 2026070606_1783341126  Running Pre-processes at egeon  Running PreBAM